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Karst microbiological database

Karst microbiological database represents a collection of microbial isolates for internal use was created in 2017 at the Karst Research Institute ZRC SAZU, due to the need for more detailed phenotypic and genetic analysis of microbiota from karst environments. The digital database resulted from the collection contains information on isolates from different karst habitats, including the date of sample collection, location and identification information. The isolates are subject to basic phenotypic analysis upon recovery from the environment.



Some isolates undergo further phenotypic or genotypic characterisation. The dataset contains more than 500 records, with a majority of Escherichia coli isolates.



Aknowledgement: https://doi.org/10.3986/ac.v49i2-3.9103



The data are available by request from Dr. Janez Mulec ( janez.mulec@zrc-sazu.si).

Simple

Date (Creation)
Status
On going
Point of contact
Organisation name Individual name Electronic mail address Role

IZRK ZRC SAZU

Janez Mulec

janez.mulec@zrc-sazu.si

Custodian
Keywords
  • microbiology

  • karst

  • Slovenia

  • LifeWatch Slovenia

  • RI-SI-LifeWatch

  • LTER Slovenia

  • caves

  • karst springs

  • microorganisms

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S
E
W
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Digital transfer options

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Metadata

File identifier
28b6a390-8254-479b-ba55-c70f59e121d6 XML
Metadata language
English
Hierarchy level
Services and databases
 
 

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Spatial extent

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IZRK Metadata Portal
The IZRK Metadata Portal was developed at the Data Centre of the Karst Research Institute ZRC SAZU from 2021 to 2022 using the GeoNetwork platform to build a system management and user interface for multidisciplinary environmental data mining and access to data products. The architecture of the new metadata portal is compliant with FAIR data principles and data lifecycle, and is collecting and mapping various datasets, databases, research sites and instruments, virtual laboratories, workflows, and codes. The portal offers data for multidisciplinary KARST database and for multidisciplinary research that covers all domains and functionalities of a karst landscape. Moreover, the portal is designed to provide a temporal and spatial link between specific sites and their data as part of three main projects:
  • RI-SI-LifeWatch (2019 - 2021)
  • RI-SI-EPOS (2019 - 2021)
  • eLTER RI (2020 - 2025)
Publisher

Karst research Institute ZRC SAZU , Postojna, Slovenia

ISSN 2820-588X



Year of preparation

2021 - 2022



Design and editing

Magdalena Aljančič, Žan Kafol, Tanja Pipan, Stanka Šebela, Jasmina Čeligoj Biščak, Nataša Ravbar